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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
Q3MHD2
USC-OGP 2-DE database
:
Q3MHD2
Q3MHD2
General information about the entry
View entry in simple text format
Entry name
LSM12_HUMAN
Primary accession number
Q3MHD2
Secondary accession number(s)
Q96NL5
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Protein LSM12 homolog;.
Gene name
Name=LSM12
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1287
:
pI=6.52; Mw=25485
Cross-references
UniProtKB/Swiss-Prot
Q3MHD2; LSM12_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
LSM12_HUMAN
Primary accession number
Q3MHD2
Secondary accession number(s)
Q86YB1 Q96NL5
Sequence was last modified on
October 2, 2007 (version 2)
Annotations were last modified on
November 2, 2016 (version 92)
Name and origin of the protein
Description
RecName: Full=Protein LSM12 homolog;
Gene name
Name=LSM12
Encoded on
Name=LSM12
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Direct protein sequencing
;
Phosphoprotein
;
Polymorphism
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AK055218; BAB70877.1
; -; mRNA
EMBL
BC044587; AAH44587.1
; -; mRNA
EMBL
BC105288; AAI05289.1
; -; mRNA
CCDS
CCDS11475.1; -. [Q3MHD2-1]
; .
RefSeq
NP_689557.1; NM_152344.3. [Q3MHD2-1]
; .
UniGene
Hs.355570; -
; .
ProteinModelPortal
Q3MHD2; -
; .
BioGrid
125889; 27
; .
IntAct
Q3MHD2; 5
; .
STRING
9606.ENSP00000293406; -
; .
iPTMnet
Q3MHD2; -
; .
PhosphoSitePlus
Q3MHD2; -
; .
BioMuta
LSM12; -
; .
DMDM
158705881; -
; .
EPD
Q3MHD2; -
; .
MaxQB
Q3MHD2; -
; .
PaxDb
Q3MHD2; -
; .
PeptideAtlas
Q3MHD2; -
; .
PRIDE
Q3MHD2; -
; .
DNASU
124801; -
; .
Ensembl
ENST00000293406; ENSP00000293406
; ENSG00000161654. [Q3MHD2-1]; .
Ensembl
ENST00000591247; ENSP00000466718
; ENSG00000161654. [Q3MHD2-1]; .
GeneID
124801; -
; .
KEGG
hsa:124801; -
; .
UCSC
uc002iev.3; human. [Q3MHD2-1]
; .
CTD
124801; -
; .
GeneCards
LSM12; -
; .
H-InvDB
HIX0034611; -
; .
HGNC
HGNC:26407; LSM12
; .
HPA
HPA051934; -
; .
MIM
611793; gene
; .
neXtProt
NX_Q3MHD2; -
; .
OpenTargets
ENSG00000161654; -
; .
PharmGKB
PA142671502; -
; .
eggNOG
KOG4401; Eukaryota
; .
eggNOG
ENOG410Y6A1; LUCA
; .
GeneTree
ENSGT00390000006956; -
; .
HOGENOM
HOG000006611; -
; .
HOVERGEN
HBG057351; -
; .
InParanoid
Q3MHD2; -
; .
OMA
GKPNLND; -
; .
PhylomeDB
Q3MHD2; -
; .
ChiTaRS
LSM12; human
; .
GenomeRNAi
124801; -
; .
PRO
PR:Q3MHD2; -
; .
Proteomes
UP000005640; Chromosome 17
; .
Bgee
ENSG00000161654; -
; .
CleanEx
HS_LSM12; -
; .
ExpressionAtlas
Q3MHD2; baseline and differential
; .
Genevisible
Q3MHD2; HS
; .
InterPro
IPR019181; Anticodon-binding_dom
; .
Pfam
PF09793; AD
; 1; .
SMART
SM00995; AD
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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